BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B03LP1|AL428666
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 1721 0.0
>3x_Contig1271
Length = 7459
Score = 1721 bits (868), Expect = 0.0
Identities = 873/875 (99%)
Strand = Plus / Minus
Query: 1 atgtnttaatttttttgcaagggaaaccgaaaactttcatctcaaggtagatttggtggt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 atgtattaatttttttgcaagggaaaccgaaaactttcatctcaaggtagatttggtggt 1156
Query: 61 tttttaaagggatcttacgaatattcactgatgactattgaaaaatgggtttcgtcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 tttttaaagggatcttacgaatattcactgatgactattgaaaaatgggtttcgtcattt 1096
Query: 121 ccagtttaggagcaatggacaccggtaacagaaatcggtcctgaattcaattaaacggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ccagtttaggagcaatggacaccggtaacagaaatcggtcctgaattcaattaaacggag 1036
Query: 181 atgtttaatatcggaggaaactttcagttgggaggacgaatgcatcaatccactaattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 atgtttaatatcggaggaaactttcagttgggaggacgaatgcatcaatccactaattgc 976
Query: 241 ttttttctcacttcggagggtccaaaactttcaactctgcagccaaggaaaacctagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ttttttctcacttcggagggtccaaaactttcaactctgcagccaaggaaaacctagttt 916
Query: 301 catcgctgggaaacgttgaatagcgtacggctgaataaatgagagttaaacgggtggatt 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 915 catcgctgggaaacgttgaatagcgtacggctgaataaatgagagtaaaacgggtggatt 856
Query: 361 gtgtcaaaccgcaaaaacaaaaattaatcggagtagcatcggagtaatgaactaaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gtgtcaaaccgcaaaaacaaaaattaatcggagtagcatcggagtaatgaactaaatcaa 796
Query: 421 ctggctcttaaggtgttttgtatcagtcctgcacccacctgctctccattcccgggaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ctggctcttaaggtgttttgtatcagtcctgcacccacctgctctccattcccgggaaca 736
Query: 481 ttcacgtgacattatattgttctttagcccgggatcagcgatcgcacccaggacctaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttcacgtgacattatattgttctttagcccgggatcagcgatcgcacccaggacctaccc 676
Query: 541 tccccactcttcttccagtcaaactcaaaaaaaagcattctaaccgttgcaaacttagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tccccactcttcttccagtcaaactcaaaaaaaagcattctaaccgttgcaaacttagac 616
Query: 601 tatttctgcagaaactcatgtaccccacttcagccattactggtgttttagcctttcagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tatttctgcagaaactcatgtaccccacttcagccattactggtgttttagcctttcagt 556
Query: 661 aaccgaagcaggctgtaactgtttctgagcgacagaaaataccatagaggctccagacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaccgaagcaggctgtaactgtttctgagcgacagaaaataccatagaggctccagacct 496
Query: 721 cttacttctgatacgcacgattctagccgaaaaactaaaagaaaaccaacagaaagcaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cttacttctgatacgcacgattctagccgaaaaactaaaagaaaaccaacagaaagcaga 436
Query: 781 aacctttgtttttctgagtgttgggagaacatcgtacaaaacgacaattgcccctcactt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aacctttgtttttctgagtgttgggagaacatcgtacaaaacgacaattgcccctcactt 376
Query: 841 gctcccctgatatcctttgacccggagtttttttt 875
|||||||||||||||||||||||||||||||||||
Sbjct: 375 gctcccctgatatcctttgacccggagtttttttt 341
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6096
Number of Sequences: 1807
Number of extensions: 6096
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)